Insertion junction: CLIP2.046147_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046147
Chromosome:chromosome 14
Location:2346219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g623050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCCAGAGGGGTCCTGGGCGCCCGCAGGTCGAGCTCGGCGATGCGCCG
Internal bar code:AGTTCTGATAAATTCGTATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:342
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAGGAAACGGCCAAGAT
Suggested primer 2:TGCCTCCTTGCCTCGAAAAT