Insertion junction: CLIP2.046154_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046154
Chromosome:chromosome 12
Location:2335977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508100 (1 of 2) PTHR21580//PTHR21580:SF21 - SHIPPO-1-RELATED // O(6)-METHYLGUANINE-INDUCED APOPTOSIS 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGGCCCGTTGTTGGCGGCCCAGTTCGTGCGGGAACTGGTGCCGAAG
Internal bar code:GAGGTGCTTTACGTTTGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3994
LEAP-Seq percent confirming:88.6364
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCAACAGCCCCTGCATA
Suggested primer 2:TGAAACGAGTGTCCTCCGTG