Insertion junction: CLIP2.046157_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046157
Chromosome:chromosome 12
Location:9874747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543902 (1 of 1) 2.7.1.16 - Ribulokinase / L-ribulokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCAAACCGCGAGTGCCACGTATTATTAATTGCTATTCCCTATTGTAG
Internal bar code:GGCGCACCTCGCAGGAGTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1979
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCTTGAGTGTGAGTCCT
Suggested primer 2:CTGTCGTGCCTTCCTCACTT