Insertion junction: CLIP2.046159_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046159
Chromosome:chromosome 11
Location:1439504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469500 FXL6 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTATGAAACATTCCTGGACACGGACCCGCCCATGGTGCGTACGCAGTG
Internal bar code:CCGATCGCCATCGAAACCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:930
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTTATGAGAGAGGGGGT
Suggested primer 2:CTGTCCTCGCTTACACGGTT