Insertion junction: CLIP2.046161_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046161
Chromosome:chromosome 12
Location:5977373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534100 COL,CON2 (1 of 3) PTHR31319//PTHR31319:SF10 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-RELATED; CONSTANS-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTTCCAGGACCTCTTCCCGCGCTCCGGTGCTGACACCACCACCGCCT
Internal bar code:CTGTATATTAAGGACGTTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1504
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCATCTGACACACACA
Suggested primer 2:CTTCCGAGTCTGGGACCAAC