Insertion junction: CLIP2.046164_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046164
Chromosome:chromosome 16
Location:3762977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684861 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTGCAGCAGCCGTCGATGAGCGCCTCTGGCTACTCTGGGGCAGGCAG
Internal bar code:GATACAGGGTGATTTACGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3415
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGACCTCGCTGCAACAT
Suggested primer 2:GATGCCTCCTACGAAGTCCG