Insertion junction: CLIP2.046164_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046164
Chromosome:chromosome 16
Location:3763217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684861 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTCGCCTGCCGCCGCCGCCGCCGCCGCGCCGTCGAGGCCTGTAGCTG
Internal bar code:GATACAGGGTGATTTACGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:908
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCCTCCTACGAAGTCCG
Suggested primer 2:TTCAGACCTCGCTGCAACAT