Insertion junction: CLIP2.046167_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046167
Chromosome:chromosome 17
Location:1280229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705250 (1 of 3) IPR002889//IPR013994 - Carbohydrate-binding WSC // Carbohydrate-binding WSC, subgroup intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCCGTGGGTGCTGGGCAGCGCCAGGCCACCAGGCCATTCCACGGGAC
Internal bar code:ACTTTAACGGTGGAAGTTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1874
LEAP-Seq percent confirming:77.5
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGCATTGACCTAGGTGC
Suggested primer 2:TGTCTGTGGGTCACGAAAGG