Insertion junction: CLIP2.046169_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046169
Chromosome:chromosome 9
Location:3695705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397290 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAGAGCCGCTGACACTGGCTCACCCAAAAGTCGTGCCGTTCCTGGCG
Internal bar code:CAGCTAATATTTGTAGGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAGTACTGGCACGTGAC
Suggested primer 2:GGACTTGACAGCTTCGGTGA