Insertion junction: CLIP2.046169_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046169
Chromosome:chromosome 9
Location:3695706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397290 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGCGCCAGGAGCCCTGCCGAGTCCCTGCGCCTGCTCCTCCTCCTCCA
Internal bar code:TTCTTTTATATTTTGATAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2263
LEAP-Seq percent confirming:74.359
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTTGACAGCTTCGGTGA
Suggested primer 2:TGTGAGTACTGGCACGTGAC