Insertion junction: CLIP2.046175_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046175
Chromosome:chromosome 12
Location:9286117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542500 STM6,MOC1 Mitochondrial transcription termination factor; (1 of 10) PF02536 - mTERF (mTERF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCGGTCCAGGGAGAGCTGGAAGGCCTGAGCGGCAGAGGGGGAGCGGC
Internal bar code:ATTATGTGAATTGCAAATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:858
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGGGGTATCGCCGAACG
Suggested primer 2:AGATGCTGAGGTGGTGGTTG