Insertion junction: CLIP2.046183_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046183
Chromosome:chromosome 3
Location:4174737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173250 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACCTGCGCCATGACCCATGCCACCACCCCAGTCGAAGCCAGAGTG
Internal bar code:ATTAAGTGACAAGCTTAGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2382
LEAP-Seq percent confirming:93.1818
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGTTTGTGCCGTGCTC
Suggested primer 2:CTCCCCCTTCATCCCCAGTA