Insertion junction: CLIP2.046194_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046194
Chromosome:chromosome 12
Location:5655785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531750 GT90-23,GT90F23 (1 of 2) K13667 - protein glucosyltransferase (RUMI, KTELC1); GT90 family protein 23 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCGGCCGATGTTCCATGGGCGGAAGCCGGACTCACCAGCTGGTGTTG
Internal bar code:AACCTCGCGACGATTCTGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1037
LEAP-Seq percent confirming:22.7273
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTATACCACGACGAGCCCAC
Suggested primer 2:ATACCCTGCCCAGCTTTGAC