Insertion junction: CLIP2.046201_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046201
Chromosome:chromosome 12
Location:5827233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533150 (1 of 3) PF07452 - CHRD domain (CHRD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGTGCGCTCAAAGGTGGCGGAGCCCTGCGGAGAGACGAGGAGTGTG
Internal bar code:GTCCGGGAGCAATCCCCTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1911
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAAACACGTTCGTGACC
Suggested primer 2:ATACCGTGTCCCACCCTGTA