Insertion junction: CLIP2.046202_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046202
Chromosome:chromosome 12
Location:4766752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523150 PFD5 Prefoldin alpha subunit; (1 of 1) K04797 - prefoldin alpha subunit (pfdA, PFDN5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCGGGGGCCGAGGCAGGGGGGGGTGCTTCGGGCGTCCAGCAGCTCAA
Internal bar code:TGAGTACTAGACCTTAGAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTTCAGGGTCTGCAAGA
Suggested primer 2:CGCTGGCAAGTTATGGATGC