Insertion junction: CLIP2.046212_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046212
Chromosome:chromosome 17
Location:2835255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718500 MMP2,MMP1,GLE1 (1 of 2) IPR008752//IPR016517 - Peptidase M11, gametolysin // Peptidase M11, autolysin; Matrix metalloproteinase, gamete lytic enzyme (G-lysin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGAAGCCAAACACGCGCTCCGACTGGATGCCGTTGTAGGCGTGGACC
Internal bar code:GGGCGTAGGGAACGTTAATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:924
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTTTCGTACACGTCCGT
Suggested primer 2:ATCAACAGCAACACCGCAAC