Insertion junction: CLIP2.046221_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046221
Chromosome:chromosome 8
Location:3385242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGGCCGACCGCGGCTGGCTGATCCACCCGCGGCAGAACCGCCTGGC
Internal bar code:ATTATATTAATGACAGTTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:82
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTCCCTCCAGAAGGCCA
Suggested primer 2:GCGCGGTATGTGTGCTAAAG