Insertion junction: CLIP2.046227_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046227
Chromosome:chromosome 17
Location:2834751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718500 MMP2,MMP1,GLE1 (1 of 2) IPR008752//IPR016517 - Peptidase M11, gametolysin // Peptidase M11, autolysin; Matrix metalloproteinase, gamete lytic enzyme (G-lysin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAAGCACAAGTGACAAGCTGACCTTTCGTACACGTCCGTTGCCCCTGT
Internal bar code:TGATCGCGTCCTGTGAATGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2903
LEAP-Seq percent confirming:58.9744
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGGGTGAAGTCCAGGTG
Suggested primer 2:CCACAGAAAGTCACGTCGGA