Insertion junction: CLIP2.046228_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046228
Chromosome:chromosome 6
Location:2669500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270500 (1 of 1) PF00759//PF03067 - Glycosyl hydrolase family 9 (Glyco_hydro_9) // Chitin binding domain (Chitin_bind_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGCAGCGCTGCCGTACAGCTGGGCTGTGTCCACGCTGGCTTGGTCT
Internal bar code:TAATATATTCAGGTGCTTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:899
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATTGGGGTTAGGTGGGG
Suggested primer 2:GACTACGCCGCACTTATCGA