Insertion junction: CLIP2.046231_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046231
Chromosome:plastome
Location:19013
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802270 petB,ChreCp008,2717017 cytochrome b6; (1 of 1) K02635 - cytochrome b6 (petB) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGTATGTACAGTTTCTTTTGGTGTAACAGGTTATTCATTACCATGG
Internal bar code:CTCGTCGATCGCGGTTGAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:230
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTCCATCACGAAGGCT
Suggested primer 2:CCCCTTCGGGCAACTAAAGT