Insertion junction: CLIP2.046232_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046232
Chromosome:chromosome 3
Location:1283977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150101 NRT2D Nitrate/nitrite transporter; (1 of 5) PTHR23515//PTHR23515:SF2 - FAMILY NOT NAMED // HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGATGCATGTCAGTGATTGTGCTCTTCGTGGCGGGCCGCACCCGTGCT
Internal bar code:CGCGGGCAGTACTCGGGGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4675
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGATGCTGCTGCTGCTTA
Suggested primer 2:CCTGCTATTTGCGACACAGC