Insertion junction: CLIP2.046244_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046244
Chromosome:chromosome 7
Location:4718328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345300 UAP1 UDP-N-acetylglucosamine-pyrophosphorylase-related protein; (1 of 1) K00972 - UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase (UAP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTTACTTGACAAAGCCCAACGAAACAGGTCCCAATAGTGAAGGCAGG
Internal bar code:TGCGTCTGGAGGTATCAATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2937
LEAP-Seq percent confirming:83.6364
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACAATGCACCGCAATC
Suggested primer 2:CTGCTCCTCCTCCTCCTTCT