Insertion junction: CLIP2.046245_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046245
Chromosome:chromosome 13
Location:4861031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605100 PDE20 (1 of 1) PF00233//PF01590 - 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I) // GAF domain (GAF); 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAAGAAGTGAAGGCGACACCAGGAACAATAGTATGGCAGGCACCCGGG
Internal bar code:CGGGTGTCAAAGGTGGTGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTCCCTTTCCTTCACGC
Suggested primer 2:CAGCTCTTGGCCTTCTTGGA