Insertion junction: CLIP2.046253_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046253
Chromosome:chromosome 5
Location:2429075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238687 PHC35 Pherophorin-chlamydomonas homolog 35; (1 of 1) IPR011993//IPR024616 - Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) // Pherophorin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAACAGAGTAAGGCATGCTCGCCTGGGCGTCCTCATTAGTACTGCCCT
Internal bar code:TATATTTGCTGCAGTAATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:155
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGAGGGAGGAGGAG
Suggested primer 2:GAGTACCGCGAGCTCTACAC