Insertion junction: CLIP2.046254_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046254
Chromosome:chromosome 1
Location:5542895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039500 FAP89 Flagellar Associated Protein 89; (1 of 3) PTHR22847:SF361 - JOUBERIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCACCAGGGCCGGCGGCGGGTCGGCCTCATCCAGCGCATCCAGCAGC
Internal bar code:CTTTTCGCGGAGTAGGGTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1593
LEAP-Seq percent confirming:95.0617
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGAGGTAGAGGGCTTG
Suggested primer 2:CTTGTGCAGGGAGTACACGT