Insertion junction: CLIP2.046259_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046259
Chromosome:chromosome 13
Location:2641671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581200 (1 of 1) PTHR12241//PTHR12241:SF1 - TUBULIN TYROSINE LIGASE-RELATED // TUBULIN--TYROSINE LIGASE PBY1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGATGGCTGCTCGGACCTCCCACTGCAGCGGCAGCCTTTTTCTTGTG
Internal bar code:GAAGTATGTATAGTAGTAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1003
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGATGTCATGCAAGCGTCG
Suggested primer 2:GAACTGTCACAGCTGACCGA