Insertion junction: CLIP2.046264_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046264
Chromosome:chromosome 16
Location:389176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693750 (1 of 1) K11462 - polycomb protein EED (EED) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAACCTTCACAAGCCTGCATTTGCTTCCATGACTATTGCAGCACTGC
Internal bar code:AAAAGGCTTGTGTAGGGTCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTACACCTGCAACACCTCGA
Suggested primer 2:CAAGGAAACCCACAAGTGCG