Insertion junction: CLIP2.046267_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046267
Chromosome:chromosome 3
Location:3319385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165900 PGM17 (1 of 3) 3.1.3.46 - Fructose-2,6-bisphosphate 2-phosphatase / Fructose-2,6-bisphosphatase; Putative phosphoglycerate mutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGCGGTCGTCACGTGGCGTGACAAAGTCTGTCAATGCACCAACCCCGC
Internal bar code:GAATGTCTCATAATTAAATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1344
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAATCGCTTGGAGCATGG
Suggested primer 2:CTAACGCGCAACATGACCAG