Insertion junction: CLIP2.046271_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046271
Chromosome:chromosome 10
Location:4984620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454300 (1 of 1) IPR003613//IPR011009 - U box domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACAACAGTCCACACGCGCACCACCTAGTCAGCTTTTGCCCAGCTGA
Internal bar code:TTGCGGTTCTAAAACAGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2523
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAAGGCGTAAACACTCC
Suggested primer 2:ACGACTGTACGTTTCGGGTC