Insertion junction: CLIP2.046279_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046279
Chromosome:chromosome 3
Location:4904850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178700 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCCACGTTCACAGGTTGTGTCCGGCGCCGCCCCGCCCCCCGCACCTG
Internal bar code:TATGGCACCTTTTTTCTCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGGACGTGCTTTTG
Suggested primer 2:CTACGGCAAGTCATCCCCAC