Insertion junction: CLIP2.046282_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046282
Chromosome:chromosome 3
Location:6372500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192501 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGGGGTCAGAGGCCGGCCGGCGGGGGTCAGGGCCATCCGGGGAAAGG
Internal bar code:TGCTTGGGGTCCATTACATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:369
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTAACTGCACTGCCTGAC
Suggested primer 2:GGCAACGCAAAGGAAACCAT