Insertion junction: CLIP2.046287_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046287
Chromosome:chromosome 2
Location:3072057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095900 ROC114,ROC108 Rhythm Of Chloroplast 114; (1 of 13) PF00646 - F-box domain (F-box) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTCTCCAGCGCGCCCTCGCGCGACTGCGTCGACGTCAGGTTGAAGTT
Internal bar code:GGGAAATTTAGCTGAGAAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:645
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACTCGCGGATGATGAGA
Suggested primer 2:ACAGCAAGCCTGGCATACAT