Insertion junction: CLIP2.046288_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046288
Chromosome:chromosome 16
Location:7019786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673729 CPN11 Chaperonin 11, chloroplastic; (1 of 1) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGTCTCCTTTCTCGTCCGCGCGTGCACCGCCTTTAGCGCGTTTTTC
Internal bar code:CTGTGGGGCTATGGCATCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACCACGACACAAGCCTG
Suggested primer 2:GCCGAGCGATTACTTTGCAG