Insertion junction: CLIP2.046297_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046297
Chromosome:chromosome 16
Location:422163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693450 ISG-C1 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCACCACCACCGCCACCACCGCCATGCGCGCAGGTGCGCTCCGACGC
Internal bar code:TCGAAATTTCACGGTGGAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGGCTTTTGTCGCGTCT
Suggested primer 2:TCCCTCATCTCCATGCTCCA