Insertion junction: CLIP2.046298_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046298
Chromosome:chromosome 1
Location:6668444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047450 CPLD17,OTU2 (1 of 1) PTHR12419//PTHR12419:SF8 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED; conserved expressed organelle-targeted protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTCCTGCTTGCAGCTGTGCGTGGGCACCTGCCCACGCCACCAGTGGT
Internal bar code:GGACGGCCTTTCTTGGCGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1034
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGACATGGTTTTGCAGT
Suggested primer 2:TTGCGGTCTCCCCATTGTAC