Insertion junction: CLIP2.046330_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046330
Chromosome:chromosome 10
Location:3406576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444000 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGGAATGCACCATGGCTTGCGCACGCTACGCTACCAATTTTCCCGAT
Internal bar code:TTTTAATGTGCAGTTACCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2936
LEAP-Seq percent confirming:98.3607
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGAGGCAGTCAAAGGC
Suggested primer 2:TGGTTCGCATGAGAGCAGTT