Insertion junction: CLIP2.046340_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046340
Chromosome:chromosome 12
Location:6537015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538050 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCACCGCTCCACGCTCAACAGCGCGCAATCCACCGTCTTCAGCAAGG
Internal bar code:CTGCTTCTAACTGATCTCATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:682
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGTTGGAAGCCTTTTGG
Suggested primer 2:TCGTGAAGGCCGAGTGTTAC