Insertion junction: CLIP2.046340_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046340
Chromosome:chromosome 12
Location:6537032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538050 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTCGTTGGCGGTGGTCATGGTGGGGTCCGCCTGATGATGGGGACGAG
Internal bar code:ATTTTATCACATCGCAACTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1491
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGAAGGCCGAGTGTTAC
Suggested primer 2:CGTGGTTGGAAGCCTTTTGG