Insertion junction: CLIP2.046346_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046346
Chromosome:plastome
Location:30887
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802279 rps8,2716952 30S ribosomal protein S8; (1 of 1) PTHR11758//PTHR11758:SF17 - 40S RIBOSOMAL PROTEIN S15A // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCTAAAATACGTAAAATATCTTTATGGTTTGAATAAATGCGTAAACC
Internal bar code:TATCGCTCATGTCGCGTTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGGAGTTTAACGAGCGT
Suggested primer 2:TCTTTTGCAGTCGCCTTCCA