Insertion junction: CLIP2.046356_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046356
Chromosome:chromosome 6
Location:7653047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302100 (1 of 1) PTHR12907//PTHR12907:SF10 - EGL NINE HOMOLOG-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCACACCTACTGTGCGGTACTCACGCTGCGGCCTGGGCTCCAGCCTG
Internal bar code:GTGGTTAAATTGAGTCCTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1825
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGCTCCATCTGACTCCA
Suggested primer 2:CAGGGCAGGTGGATCATTGT