Insertion junction: CLIP2.046359_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046359
Chromosome:chromosome 13
Location:4909021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605386 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGATATTACAAAGAAGGGACAATCCGACCAAGCAAGGGTGCCCAGC
Internal bar code:ATTCGGGCGGCGGGGAGTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3363
LEAP-Seq percent confirming:45.614
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATGTCAGTCTCGGCCTC
Suggested primer 2:ATAAGCCGCACCAAGCTCTT