Insertion junction: CLIP2.046375_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046375
Chromosome:chromosome 3
Location:5106560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180550 FPN2,NTD5 (1 of 3) K01081 - 5'-nucleotidase (E3.1.3.5); Flagellar Associated 5'-nucleotidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAAACAGGGATGGGTTGCAGGTCCAAGGCCGTGACAAACACGATGGA
Internal bar code:ATTGTCGTCGACGACTTTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1071
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTTCAGCTTCGACCCCA
Suggested primer 2:ACCCTCAGTGTCCAGCATTG