Insertion junction: CLIP2.046376_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046376
Chromosome:chromosome 6
Location:4656298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGACCCCCAGAGGACGACCGCCAGAGCGCGCAACATGCACACCTTC
Internal bar code:TCCGGATCTTATTGATGTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3104
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCAGATTGAGGGGCAAA
Suggested primer 2:TTAATTGCGGTTGCCCTTGC