Insertion junction: CLIP2.046386_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046386
Chromosome:chromosome 4
Location:3352051
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227350 CCR4 Putative NOT-complex component; (1 of 1) K12580 - CCR4-NOT transcription complex subunit 3 (CNOT3, NOT3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCGCGGCACCCGGTGGCGGTGCCCGCCTCCTATCCGAAGGCAAGCA
Internal bar code:GATTTGTGTATATGTGATTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTCTGTGAGTTGAGGGG
Suggested primer 2:TGTGGTTTTTCGTCACGCAC