Insertion junction: CLIP2.046407_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046407
Chromosome:chromosome 7
Location:5026319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347550 (1 of 1) PTHR23389:SF6 - ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCGGGAACCGACTCACGCTCCCGTGTACTGTGCACGCCGTCAGGCTT
Internal bar code:GATCTGGTCCGCTTCCATTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1338
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGCTCGTGTAGTGCCAA
Suggested primer 2:TCGTTTTACGCAGTCACGGA