Insertion junction: CLIP2.046407_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046407
Chromosome:chromosome 7
Location:5026326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347550 (1 of 1) PTHR23389:SF6 - ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGACTACATGTCTGCTTTTTGGTTGTTCGCTTTGTTGCCCATGTCGCT
Internal bar code:GATCTGGTCCGCTTCCATTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:668
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTTTACGCAGTCACGGA
Suggested primer 2:AACAGCTCGTGTAGTGCCAA