Insertion junction: CLIP2.046414_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046414
Chromosome:chromosome 12
Location:2483215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507350 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTGACGCATCCGCACTTGCAGCTGCCGGCGGCGGCAGTGACGGAGTA
Internal bar code:GTTAGACGCGTGTTACTAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1830
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCATTTTACCAGCCCG
Suggested primer 2:AACGCTAGTGAACAGGAGGC