Insertion junction: CLIP2.046417_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046417
Chromosome:chromosome 5
Location:3586193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCCGCTATTGAGATTACTGTACCATGAGATAGCTTCATAACGCCATC
Internal bar code:CTCCTATTGAGAGCACGGCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5432
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGTCATACTCCACGCTC
Suggested primer 2:GCAGGCGTCTACCTCATCTC