Insertion junction: CLIP2.046417_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046417
Chromosome:chromosome 11
Location:2615992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095082 (1 of 4) PF00956 - Nucleosome assembly protein (NAP) (NAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATCATGAATGTGACCCCCATTCCATACTCACGTCTTTGTCCTGCGCC
Internal bar code:CTTGGCGCTCCGGGTGAGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:498
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTCGCAAGCAACACGAG
Suggested primer 2:ATCACACGCAAACAACCACG