Insertion junction: CLIP2.046428_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046428
Chromosome:chromosome 9
Location:2544900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392750 (1 of 1) PTHR10972:SF45 - OXYSTEROL-BINDING PROTEIN 9 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCGTTGCCGGTGGGTGCCGGTGCTAGGGAGTTTGTGGTGGGGGCGTG
Internal bar code:TTACTCACGACTTTCCGTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CATTTCCCCTTCCCCTTCCC
Suggested primer 2:CAGCTCTGGAACTGGCTCAA